Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891994.1_cds_XP_016446903.1_41717
CDS Infomation

[gene=LOC107771945] [db_xref=GeneID:107771945] [protein=F-box protein At5g03100-like] [protein_id=XP_016446903.1] [location=complement(join(160535..160843,162927..163091,163562..163621,163667..164581))] [gbkey=CDS]
Sequence

ATGGAAATGCAGAGGAAAATCATGGCGAGAGGAGATCGAGACCGACTCAGTGATTTGCCC
GACGCTATTCTACTATACATCCTCTCTATGTTGCCGGAGGGAAAAGAAGTTGTGAGAACC
AGCGTATTATCTCAGCGATGGCGGTTTCTTTGGAAGTCCGTTGCAGTGTCAGTCAATTTC
GGCGTCCTCGATTACCCCTATGATGAAAGAACCAAAAAGAAAATTCTTGCTTTCGTAGCT
TCAATCAATAGAGAGCTTCATTATTGGAGGTGCTGCGAGAAAATCAAAGCATTTAGGGTG
TTTCCCGTTAAATACAAAGAGTATCTTGTTAAAGATGTGGATTTTTGGGTACATTTTGCA
ACTAAGGTTGCTAATGTTGAAGAGTTTACACTTAAATTTTGCATTATCAATTTTCCAGAT
TACGTGTATAAGTTTCCTCAGTTTGCGTATAAGAATACGTCGTTAAGGAATTTGGTTTTG
GGCAACTGCGGGTTAAACCCTTCTGGTAGTGTGAACTGGAGCAGTCTCGTTTCTCTTTCA
ATTGGGCACCTGAAATTGACGGACAGTGTAATGGAAAAAATAATATCAGGTTGCCCTAAA
TTGGAGAGCTTGGAACTGGATAATGTTTTGGGCATTCGTTGTTTGGTAATCAGCTCGGTG
AAGCTGAGAAAGTTGATCATATTAAATGATGAAATTAATGAATATACCCAGTGGCACGAT
GAAAATATCCCTTCACTCGAGATATTTGCCCCGTATGTTCAAAATTTGGTACTTTCGGGG
TTCTTATACGACGAGATAAGCTTGCAGCAGAGCAATGTGGCTTCACTTGTCACTGCAGTC
CTTAATTTAAATGTTGATTTTGTTGAATTTGAAGATGAAGAAGAGAAATTGGAGAAGGAG
TGTAGATATTTGAAGGAATTTCTTCTTAGCGTTTCCCATGTCGAGAATGTTGAATTGGGT
CCCTGGTGCATCAAGTGGCTTTCCATACTGGAGCTGAAAGGGTGGCAATCTCCACCTTCA
AGCTGGAAATACTTAAAACTTATCGCAGCCTTGGAACACTTGCCTGGAATTTACAGCATT
CTACAGAGTTCATCGGAGCTTGAGACATTGGTCATTGACTGGGCCAATTACGAAACGATA
GACCGGCTGCTAAGTTACACAAATGAGGTTCAACAGAGCAGGAGTGTTGAGACACATAAT
GTTAACTGCTCACTGCTACACCTAAAGACCATCAAGATCATTAACTTTCATGGACCACTA
AGTGGAAATAATCTTGTACTTCGATTGGTCAAATATTTGCTCAAGAATGCAACAGTGCTA
GAAAAATTGGTCATTGTTGCCAAATTCGAAGGGAGTGATGCGCCTCAGGATTATGTTAAA
GTGGAACAGGAGTTCCTAAGCTTTCCAAGATCATCTTTGCATGCTTCAGTTGTCTTTTCT
TATGGATGA

Peptide Sequence

PEP ID

XP_016446903.1
PEP Infomation

PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
Sequence

MEMQRKIMARGDRDRLSDLPDAILLYILSMLPEGKEVVRTSVLSQRWRFLWKSVAVSVNF
GVLDYPYDERTKKKILAFVASINRELHYWRCCEKIKAFRVFPVKYKEYLVKDVDFWVHFA
TKVANVEEFTLKFCIINFPDYVYKFPQFAYKNTSLRNLVLGNCGLNPSGSVNWSSLVSLS
IGHLKLTDSVMEKIISGCPKLESLELDNVLGIRCLVISSVKLRKLIILNDEINEYTQWHD
ENIPSLEIFAPYVQNLVLSGFLYDEISLQQSNVASLVTAVLNLNVDFVEFEDEEEKLEKE
CRYLKEFLLSVSHVENVELGPWCIKWLSILELKGWQSPPSSWKYLKLIAALEHLPGIYSI
LQSSSELETLVIDWANYETIDRLLSYTNEVQQSRSVETHNVNCSLLHLKTIKIINFHGPL
SGNNLVLRLVKYLLKNATVLEKLVIVAKFEGSDAPQDYVKVEQEFLSFPRSSLHASVVFS
YG

Transcript Sequence

Gene sequence data has not been registered.